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Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/ | Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/ | ||
ATSAS forums at EMBL: http://www.saxier.org/forum/index.php?sid=ebea93cfd38748094057328524d6489d | |||
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Revision as of 12:57, 31 July 2012
General Thoughts
AJJ - Adrian mentioned metadata and search engine optimization. This is an important issue - Google has a document about this: [Google SEO Guide]
ARR - Here are some preliminary ideas for extra metadata to put on the site:
<META name="description" content="Portal for small angle scattering - information and resources">
<META name="keywords" content="SAS, SAXS, SANS, reflection, facilities, beam lines, instruments, programs, software, conferences, jobs, news">
Dates meetings and calendar
Learn about Small Angle Scattering
Wikipedia
http://en.wikipedia.org/wiki/Small-angle_scattering
http://en.wikipedia.org/wiki/Small-angle_neutron_scattering
http://en.wikipedia.org/wiki/Small-angle_X-ray_scattering
Tutorials
SANS at NIST, movies and pdfs: http://www.ncnr.nist.gov/programs/sans/tutorials/index.html
Boualem Hammouda's polymer based tutorial for SANS: http://www.ncnr.nist.gov/staff/hammouda/
List of EMBO courses for biological macromolecues, with recommended reading links: http://www.embl-hamburg.de/biosaxs/courses/
BIOISIS (ALS at Berkeley) tutorial for biological macromolecules studied with SAXS. Includes sample preparation, measurement, reduction and analysis: http://bioisis.net/tutorial
ORNL SANS (PDF links only): http://neutrons.ornl.gov/research/techniques.shtml
Diamond, UK, "Beginner's guide to SAXS" (PDFs) and useful links: http://www.diamond.ac.uk/Home/Beamlines/small-angle/Beginners-Guide-to-SAXS.html
RKT SANS applets: http://rkt.chem.ox.ac.uk/techniques/smallanglescattering.html
Instruments and facilities
Worldwide neutron sources: http://www.neutron.anl.gov/
Worldwide synchrotron sources: http://www.lightsources.org/cms/
Worldwide directory of SANS instruments (not fresh): http://www.ill.eu/instruments-support/instruments-groups/groups/lss/more/world-directory-of-sans-instruments/
Anton Paar SAXS: http://www.anton-paar.com/SAXS/59_Corporate_en?productgroup_id=107
Bruker SAXS: http://www.bruker-axs.com/nanostar.html
There is a page listing neutron reflectometers and software for neutron reflectometry at: http://material.fysik.uu.se/Group_members/adrian/reflect.htm .
Facilities and their SAS & Refelctometery instruments
ISIS: http://www.isis.stfc.ac.uk/
SANS LOQ: http://www.isis.stfc.ac.uk/instruments/loq/ SANS2d: http://www.isis.stfc.ac.uk/instruments/sans2d/ NIMROD: http://www.isis.stfc.ac.uk/instruments/nimrod/nimrod2468.html Lamor (NSE-SANS, in coming): http://www.isis.stfc.ac.uk/instruments/larmor/larmor8239.html Reflecrometer CRIPS: http://www.isis.stfc.ac.uk/instruments/crisp/crisp2466.html Inter: http://www.isis.stfc.ac.uk/instruments/inter/inter2471.html Offspec (with NSE): http://www.isis.stfc.ac.uk/instruments/offspec/offspec3048.html Polref: http://www.isis.stfc.ac.uk/instruments/offspec/offspec3048.html Surf: http://www.isis.stfc.ac.uk/instruments/surf/surf2469.html
Institut Laue-Langevin (ILL): http://www.ill.eu/
SANS D11: http://www.ill.eu/instruments-support/instruments-groups/instruments/d11/ D22: http://www.ill.eu/instruments-support/instruments-groups/instruments/d22/ D33(in coming): http://www.ill.eu/instruments-support/instruments-groups/instruments/d33/ D16: http://www.ill.eu/instruments-support/instruments-groups/instruments/d16/ Reflectometer Super Advanced Reflectometer for the Analysis of Materials: http://www.ill.eu/instruments-support/instruments-groups/instruments/superadam/ D17: http://www.ill.eu/instruments-support/instruments-groups/instruments/d17/ FIGARO (Fluid Interfaces Grazing Angles ReflectOmeter): http://www.ill.eu/instruments-support/instruments-groups/instruments/figaro/
Laboratoire Leon Brillouin, Saclay, CEA http://www-llb.cea.fr/en/
SANS Pace: Small Angle Neutron Spectrometer (isotropic scattering) http://www-llb.cea.fr/en/fr-en/pdf/pace-llb.pdf Paxy: Small Angle Neutron Spectrometer (high resolution) http://www-llb.cea.fr/en/fr-en/pdf/paxy-llb.pdf Paxe: Small Angle Neutron Spectrometer http://www-llb.cea.fr/en/fr-en/pdf/paxe-llb.pdf TPA : Very Small Angle Neutron Spectrometer TPA : Very Small Angle Neutron Spectrometer Reflectometer Eros: Time of flight reflectometer http://www-llb.cea.fr/en/fr-en/pdf/eros-llb.pdf Prism: 2 axis with polarized neutrons and polarization analysis http://www-llb.cea.fr/en/fr-en/pdf/prism-llb.pdf
FRMII http://www.frm2.tum.de/en/index.html Julich Centre for Neutron Science http://www.fz-juelich.de/jcns/EN/Home/home_node.html
SANS KWS-1 High resolution Small Angle Scattering http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS1/_node.html KWS-2 High intensity Small Angle Scattering http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS2/_node.html KWS-3 Very Small Angle Scattering http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS3/_node.html SANS-1 http://www.frm2.tum.de/en/science/diffraction/sans-1/index.html Reflectometer MARIA Magnetic Reflectometer with high Incident Angle http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/MARIA/_node.html REFSANS http://www.frm2.tum.de/en/science/diffraction/refsans/index.html N-REX+ http://www.frm2.tum.de/en/science/diffraction/n-rex/index.html Booklet http://www.frm2.tum.de/en/science/experimental-facilities-booklet/index.html
SINQ: The Swiss Spallation Neutron Source http://www.psi.ch/sinq/
SANS SANS-I Small-angle neutron scattering camera, 40m http://kur.web.psi.ch/sans1/ SANS-II Small-angle neutron scattering camera, 12m http://kur.web.psi.ch/sans2/ Reflectometer AMOR Apparatus for multi optional reflectometry http://kur.web.psi.ch/amor/ MORPHEUS 2-axes neutron diffractometer & reflectometer, zero-field spin-echo as future option http://kur.web.psi.ch/morpheus/ NARZISS Polarized neutron reflectometer http://kur.web.psi.ch/narziss/
NIST Center for Neutron Research http://www.nist.gov/ncnr/
SANS NG3 SANS http://www.nist.gov/ncnr/ng3-sans-small-angle-neutron-scattering.cfm NG7 SANS http://www.nist.gov/ncnr/ng7sans.cfm BT5 USANS http://www.nist.gov/ncnr/bt5-usans-ultra-small-angle-neutron-scattering.cfm Reflectometer NGD Off-Specular Reflectometer(MAGIK) http://www.ncnr.nist.gov/instruments/magik/ NG-1 Reflectometer (Polarized) http://www.ncnr.nist.gov/instruments/ng1refl/ NG7 Horizontal Neutron Reflectometer http://www.ncnr.nist.gov/instruments/ng7refl/
Oak Rdge National Laboratory (ORNL): http://www.sns.gov/
SNS: http://www.sns.gov/facilities/SNS/ SANS EQ-SANS: http://neutrons.ornl.gov/instruments/SNS/EQ-SANS/ USANS(in coming): http://www.sns.gov/tofusans/ Reflecrometer LR(Liquid Refelctometer: http://neutrons.ornl.gov/instruments/SNS/LR/ HFIR http://neutrons.ornl.gov/facilities/HFIR/ SANS GP-SANS: http://neutrons.ornl.gov/instruments/HFIR/CG2/ Bio-SANS: http://neutrons.ornl.gov/instruments/HFIR/CG3/
Los Alamos Neutron Science Center: http://lansce.lanl.gov/ Lujian Neutron Center: http://lansce.lanl.gov/lujan/index.shtml
SANS Low-Q Diffractometer(LQD): http://lansce.lanl.gov/lujan/instruments/LQD.shtml Reflectometers Asterix(Polarized): http://lansce.lanl.gov/lujan/instruments/ASTERIX.shtml Surface Profile Analysis Reflectometer(SPEAR): http://lansce.lanl.gov/lujan/instruments/SPEAR.shtml
NRC Canadian Neutron Beam Centre: http://www.nrc-cnrc.gc.ca/eng/ibp/cnbc.html
Reflecrometer D3 Reflectometer: http://www.nrc-cnrc.gc.ca/eng/facilities/cnbc/spectrometers/d3.html
News
Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/ ATSAS forums at EMBL: http://www.saxier.org/forum/index.php?sid=ebea93cfd38748094057328524d6489d
Resources
X-ray anomalous scattering resources (primarily for crystallography, useful for aSAXS: http://skuld.bmsc.washington.edu/scatter/
ATSAS forums: http://www.saxier.org/forum/index.php
NIST Scattering Length Density calculator: http://www.ncnr.nist.gov/resources/sldcalc.html
Another scattering length density calculator: http://sld-calculator.appspot.com/
Neutron scattering lengths: http://www.ncnr.nist.gov/resources/n-lengths/
Peptide property calculator (can caluclate amino acid volumes): http://www.basic.northwestern.edu/biotools/proteincalc.html
Software
Small Angle Scattering toolbox: http://sastbx.als.lbl.gov/wiki/index.php/Main_Page
List of SAS software (ISIS): http://www.small-angle.ac.uk/small-angle/Software.html
Downloads | ||||||||
---|---|---|---|---|---|---|---|---|
Application | Description | Author | Documentation | Windows | Linux | Unix | Mac | |
BS-2D | A Windows-based version of BSL. | N Koubassova | Documentation | W32 | n/a | n/a | n/a | |
BSL | An antiquated line-mode data manipulation package developed for 2D SAXS image data. | J Bordas & G Mant | Documentation | n/a | Linux | Solaris | n/a | |
FIT2D | General-purpose & specialist data analysis and visualisation program. | A Hammersley | Documentation | W32 | n/a | n/a | OSX | |
GDA | A customisable Jython-based software framework to operate experiments on synchrotron facilities, visualise and analyse the data. | opengda.org | Documentation | n/a | Linux | n/a | n/a | |
Mantid | MantidPlot is a version of QtiPlot customised to present a technique-independent data analysis framework for Neutron and Muon data. It is built around C++/Python and supports Python plugins and scripting. | mantidproject.org | Documentation | W32/W64 | Redhat/Ubuntu | n/a | OSX | |
XOTOKO |
Downloads | ||||||||
---|---|---|---|---|---|---|---|---|
Application | Description | Author | Documentation | Windows | Linux | Unix | Mac | |
FISH | A sophisticated, tried & tested, model-fitting program with a Java GUI. | R Heenan | Documentation | W32 | Linux | n/a | n/a | |
SANSView | A sophisticated model-fitting program built around C++/Python, supporting Python model plugins, and utilising NIST-developed model functions. | DANSE SANS Project | Documentation | W32/W64 | Linux | n/a | OSX |
Downloads | ||||||||
---|---|---|---|---|---|---|---|---|
Application | Description | Author | Documentation | Windows | Linux | Unix | Mac | |
ATSAS | A program suite for small-angle scattering data analysis from biological macromolecules. | D Svergun | Programs | W32/W64 | Redhat/Ubuntu/Debian | n/a | OSX | |
FD2BSL | CCP13 | |||||||
FDSCALE | CCP13 | |||||||
FTOREC | CCP13 | |||||||
FibreFix | A GUI-driven program environment integrating XCONV, XFIX, FTOREC & LSQINT. NB: requires MS .NET Framework 1 which is incompatible with Windows 7. | CCP13 | ||||||
HELIX | CCP13 | |||||||
LSQINT | CCP13 | |||||||
MusLABEL | CCP13 | |||||||
Sample | CCP13 | |||||||
WinLALS | Linked-Atom Least-Squares (LALS) program for building molecular and crystal structures of helical polymers and refining them to fit X-ray fiber diffraction data. | K Okuyama | Documentation | W32 | n/a | n/a | n/a |
Downloads | ||||||||
---|---|---|---|---|---|---|---|---|
Application | Description | Author | Documentation | Windows | Linux | Unix | Mac | |
CORFUNC | CCP13 | |||||||
CORFUNC Java | CCP13 | |||||||
XFIT | A GUI-driven peak-fitting program. | CCP13 | ||||||
Downloads | ||||||||
---|---|---|---|---|---|---|---|---|
Application | Description | Author | Documentation | Windows | Linux | Unix | Mac | |
CELLREF | Lattice refinement routine. | K Gardner | ||||||
DSPACE | Calculates and sorts d-spacings. | K Gardner | ||||||
EXPAND | Expands a BSL format data frame. | D Marvin | ||||||
FIT2D2RKH | Simple utility to convert FIT2D ASCII format data into ISIS SANS ASCII format data. Useful as a prelude to converting the data into BSL format with XCONV. | S King | n/a | W32 | n/a | n/a | n/a | |
XCONV | Converts several different X-ray detector (and reduced ISIS SANS) data formats to BSL format. | CCP13 | ||||||
XML Loader | For loading SASXML format data into IGOR | M Wasbrough | Documentation | IGOR ipf | n/a | n/a | IGOR ipf |
Link to a list of reflectometry software: http://material.fysik.uu.se/Group_members/adrian/reflect.htm#Analysis