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Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/
Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/


ATSAS forums at EMBL: http://www.saxier.org/forum/
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Latest revision as of 12:58, 31 July 2012

General Thoughts

AJJ - Adrian mentioned metadata and search engine optimization. This is an important issue - Google has a document about this: [Google SEO Guide]

ARR - Here are some preliminary ideas for extra metadata to put on the site:

<META name="description" content="Portal for small angle scattering - information and resources">

<META name="keywords" content="SAS, SAXS, SANS, reflection, facilities, beam lines, instruments, programs, software, conferences, jobs, news">



Dates meetings and calendar


Learn about Small Angle Scattering

Wikipedia

http://en.wikipedia.org/wiki/Small-angle_scattering

http://en.wikipedia.org/wiki/Small-angle_neutron_scattering

http://en.wikipedia.org/wiki/Small-angle_X-ray_scattering

Tutorials

SANS at NIST, movies and pdfs: http://www.ncnr.nist.gov/programs/sans/tutorials/index.html

Boualem Hammouda's polymer based tutorial for SANS: http://www.ncnr.nist.gov/staff/hammouda/

List of EMBO courses for biological macromolecues, with recommended reading links: http://www.embl-hamburg.de/biosaxs/courses/

BIOISIS (ALS at Berkeley) tutorial for biological macromolecules studied with SAXS. Includes sample preparation, measurement, reduction and analysis: http://bioisis.net/tutorial

ORNL SANS (PDF links only): http://neutrons.ornl.gov/research/techniques.shtml

Diamond, UK, "Beginner's guide to SAXS" (PDFs) and useful links: http://www.diamond.ac.uk/Home/Beamlines/small-angle/Beginners-Guide-to-SAXS.html

RKT SANS applets: http://rkt.chem.ox.ac.uk/techniques/smallanglescattering.html



Instruments and facilities

Worldwide neutron sources: http://www.neutron.anl.gov/

Worldwide synchrotron sources: http://www.lightsources.org/cms/

Worldwide directory of SANS instruments (not fresh): http://www.ill.eu/instruments-support/instruments-groups/groups/lss/more/world-directory-of-sans-instruments/

Anton Paar SAXS: http://www.anton-paar.com/SAXS/59_Corporate_en?productgroup_id=107

Bruker SAXS: http://www.bruker-axs.com/nanostar.html

There is a page listing neutron reflectometers and software for neutron reflectometry at: http://material.fysik.uu.se/Group_members/adrian/reflect.htm .



Facilities and their SAS & Refelctometery instruments

ISIS: http://www.isis.stfc.ac.uk/

SANS
 LOQ: http://www.isis.stfc.ac.uk/instruments/loq/
 SANS2d: http://www.isis.stfc.ac.uk/instruments/sans2d/
 NIMROD: http://www.isis.stfc.ac.uk/instruments/nimrod/nimrod2468.html
 Lamor (NSE-SANS, in coming): http://www.isis.stfc.ac.uk/instruments/larmor/larmor8239.html
Reflecrometer
 CRIPS: http://www.isis.stfc.ac.uk/instruments/crisp/crisp2466.html
 Inter: http://www.isis.stfc.ac.uk/instruments/inter/inter2471.html
 Offspec (with NSE): http://www.isis.stfc.ac.uk/instruments/offspec/offspec3048.html
 Polref: http://www.isis.stfc.ac.uk/instruments/offspec/offspec3048.html
 Surf: http://www.isis.stfc.ac.uk/instruments/surf/surf2469.html

Institut Laue-Langevin (ILL): http://www.ill.eu/

SANS
 D11: http://www.ill.eu/instruments-support/instruments-groups/instruments/d11/
 D22: http://www.ill.eu/instruments-support/instruments-groups/instruments/d22/
 D33(in coming): http://www.ill.eu/instruments-support/instruments-groups/instruments/d33/
 D16:  http://www.ill.eu/instruments-support/instruments-groups/instruments/d16/
Reflectometer
 Super Advanced Reflectometer for the Analysis of Materials: 
       http://www.ill.eu/instruments-support/instruments-groups/instruments/superadam/
 D17: http://www.ill.eu/instruments-support/instruments-groups/instruments/d17/
 FIGARO (Fluid Interfaces Grazing Angles ReflectOmeter): 
      http://www.ill.eu/instruments-support/instruments-groups/instruments/figaro/

Laboratoire Leon Brillouin, Saclay, CEA http://www-llb.cea.fr/en/

SANS        
 Pace: Small Angle Neutron Spectrometer (isotropic scattering) 
       http://www-llb.cea.fr/en/fr-en/pdf/pace-llb.pdf
 Paxy: Small Angle Neutron Spectrometer (high resolution) 
       http://www-llb.cea.fr/en/fr-en/pdf/paxy-llb.pdf
 Paxe: Small Angle Neutron Spectrometer http://www-llb.cea.fr/en/fr-en/pdf/paxe-llb.pdf
 TPA : Very Small Angle Neutron Spectrometer TPA : Very Small Angle Neutron Spectrometer 
Reflectometer
 Eros: Time of flight reflectometer http://www-llb.cea.fr/en/fr-en/pdf/eros-llb.pdf
 Prism: 2 axis with polarized neutrons and polarization analysis 
       http://www-llb.cea.fr/en/fr-en/pdf/prism-llb.pdf

FRMII http://www.frm2.tum.de/en/index.html Julich Centre for Neutron Science http://www.fz-juelich.de/jcns/EN/Home/home_node.html

SANS
 KWS-1 High resolution Small Angle Scattering 
  http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS1/_node.html
 KWS-2 High intensity Small Angle Scattering
  http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS2/_node.html
 KWS-3 Very Small Angle Scattering
  http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/KWS3/_node.html
 SANS-1 http://www.frm2.tum.de/en/science/diffraction/sans-1/index.html
Reflectometer
 MARIA Magnetic Reflectometer with high Incident Angle
  http://www.fz-juelich.de/jcns/DE/Leistungen/Instruments2/Structures/MARIA/_node.html
 REFSANS http://www.frm2.tum.de/en/science/diffraction/refsans/index.html
 N-REX+ http://www.frm2.tum.de/en/science/diffraction/n-rex/index.html
Booklet http://www.frm2.tum.de/en/science/experimental-facilities-booklet/index.html

SINQ: The Swiss Spallation Neutron Source http://www.psi.ch/sinq/

SANS
 SANS-I Small-angle neutron scattering camera, 40m 
  http://kur.web.psi.ch/sans1/
 SANS-II Small-angle neutron scattering camera, 12m 
  http://kur.web.psi.ch/sans2/
Reflectometer
 AMOR Apparatus for multi optional reflectometry http://kur.web.psi.ch/amor/
 MORPHEUS 2-axes neutron diffractometer & reflectometer, zero-field spin-echo as future option
  http://kur.web.psi.ch/morpheus/
 NARZISS Polarized neutron reflectometer http://kur.web.psi.ch/narziss/

NIST Center for Neutron Research http://www.nist.gov/ncnr/

SANS
 NG3 SANS http://www.nist.gov/ncnr/ng3-sans-small-angle-neutron-scattering.cfm
 NG7 SANS http://www.nist.gov/ncnr/ng7sans.cfm
 BT5 USANS http://www.nist.gov/ncnr/bt5-usans-ultra-small-angle-neutron-scattering.cfm
Reflectometer
 NGD Off-Specular Reflectometer(MAGIK) http://www.ncnr.nist.gov/instruments/magik/
 NG-1 Reflectometer (Polarized) http://www.ncnr.nist.gov/instruments/ng1refl/
 NG7 Horizontal Neutron Reflectometer http://www.ncnr.nist.gov/instruments/ng7refl/

Oak Rdge National Laboratory (ORNL): http://www.sns.gov/

SNS: http://www.sns.gov/facilities/SNS/
 SANS
  EQ-SANS: http://neutrons.ornl.gov/instruments/SNS/EQ-SANS/
  USANS(in coming): http://www.sns.gov/tofusans/
 Reflecrometer
  LR(Liquid Refelctometer: http://neutrons.ornl.gov/instruments/SNS/LR/
HFIR http://neutrons.ornl.gov/facilities/HFIR/
 SANS
  GP-SANS: http://neutrons.ornl.gov/instruments/HFIR/CG2/
  Bio-SANS: http://neutrons.ornl.gov/instruments/HFIR/CG3/

Los Alamos Neutron Science Center: http://lansce.lanl.gov/ Lujian Neutron Center: http://lansce.lanl.gov/lujan/index.shtml

SANS
 Low-Q Diffractometer(LQD): http://lansce.lanl.gov/lujan/instruments/LQD.shtml
Reflectometers
 Asterix(Polarized): http://lansce.lanl.gov/lujan/instruments/ASTERIX.shtml
 Surface Profile Analysis Reflectometer(SPEAR):
                     http://lansce.lanl.gov/lujan/instruments/SPEAR.shtml

NRC Canadian Neutron Beam Centre: http://www.nrc-cnrc.gc.ca/eng/ibp/cnbc.html

Reflecrometer
 D3 Reflectometer: http://www.nrc-cnrc.gc.ca/eng/facilities/cnbc/spectrometers/d3.html

News

Small angle scattering mailling list server archive and instructions for joining: http://www.iucr.org/__data/iucr/lists/sa_scat/

ATSAS forums at EMBL: http://www.saxier.org/forum/


Resources

X-ray anomalous scattering resources (primarily for crystallography, useful for aSAXS: http://skuld.bmsc.washington.edu/scatter/

ATSAS forums: http://www.saxier.org/forum/index.php

NIST Scattering Length Density calculator: http://www.ncnr.nist.gov/resources/sldcalc.html

Another scattering length density calculator: http://sld-calculator.appspot.com/

Neutron scattering lengths: http://www.ncnr.nist.gov/resources/n-lengths/

Peptide property calculator (can caluclate amino acid volumes): http://www.basic.northwestern.edu/biotools/proteincalc.html


Software

Small Angle Scattering toolbox: http://sastbx.als.lbl.gov/wiki/index.php/Main_Page

List of SAS software (ISIS): http://www.small-angle.ac.uk/small-angle/Software.html


For SAS Data Reduction & Visualisation
Downloads
Application Description Author Documentation Windows Linux Unix Mac
BS-2D A Windows-based version of BSL. N Koubassova Documentation W32 n/a n/a n/a
BSL An antiquated line-mode data manipulation package developed for 2D SAXS image data. J Bordas & G Mant Documentation n/a Linux Solaris n/a
FIT2D General-purpose & specialist data analysis and visualisation program. A Hammersley Documentation W32 n/a n/a OSX
GDA A customisable Jython-based software framework to operate experiments on synchrotron facilities, visualise and analyse the data. opengda.org Documentation n/a Linux n/a n/a
Mantid MantidPlot is a version of QtiPlot customised to present a technique-independent data analysis framework for Neutron and Muon data. It is built around C++/Python and supports Python plugins and scripting. mantidproject.org Documentation W32/W64 Redhat/Ubuntu n/a OSX
XOTOKO


For Model-Fitting SAS Data
Downloads
Application Description Author Documentation Windows Linux Unix Mac
FISH A sophisticated, tried & tested, model-fitting program with a Java GUI. R Heenan Documentation W32 Linux n/a n/a
SANSView A sophisticated model-fitting program built around C++/Python, supporting Python model plugins, and utilising NIST-developed model functions. DANSE SANS Project Documentation W32/W64 Linux n/a OSX


For Analysing SAS from Bio-molecular & Fibre Systems
Downloads
Application Description Author Documentation Windows Linux Unix Mac
ATSAS A program suite for small-angle scattering data analysis from biological macromolecules. D Svergun Programs W32/W64 Redhat/Ubuntu/Debian n/a OSX
FD2BSL CCP13
FDSCALE CCP13
FTOREC CCP13
FibreFix A GUI-driven program environment integrating XCONV, XFIX, FTOREC & LSQINT. NB: requires MS .NET Framework 1 which is incompatible with Windows 7. CCP13
HELIX CCP13
LSQINT CCP13
MusLABEL CCP13
Sample CCP13
WinLALS Linked-Atom Least-Squares (LALS) program for building molecular and crystal structures of helical polymers and refining them to fit X-ray fiber diffraction data. K Okuyama Documentation W32 n/a n/a n/a


For Analysing Other Types of SAS Data
Downloads
Application Description Author Documentation Windows Linux Unix Mac
CORFUNC CCP13
CORFUNC Java CCP13
XFIT A GUI-driven peak-fitting program. CCP13


Utilities
Downloads
Application Description Author Documentation Windows Linux Unix Mac
CELLREF Lattice refinement routine. K Gardner
DSPACE Calculates and sorts d-spacings. K Gardner
EXPAND Expands a BSL format data frame. D Marvin
FIT2D2RKH Simple utility to convert FIT2D ASCII format data into ISIS SANS ASCII format data. Useful as a prelude to converting the data into BSL format with XCONV. S King n/a W32 n/a n/a n/a
XCONV Converts several different X-ray detector (and reduced ISIS SANS) data formats to BSL format. CCP13
XML Loader For loading SASXML format data into IGOR M Wasbrough Documentation IGOR ipf n/a n/a IGOR ipf

Link to a list of reflectometry software: http://material.fysik.uu.se/Group_members/adrian/reflect.htm#Analysis